- What is an Open Reading Frame (ORF)?
-
An ORF is a protein-coding sequence starting with an ATG start codon, ending with
a stop codon, and devoid of both the 5’ and 3’ untranslated regions (UTRs).
- What is an ORF Clone?
-
An ORF clone is the ORF sequence pre-cloned in either a HaloTag® (FHC clones) or
an untagged Flexi® (FXC clones) vector.
- Which vectors are the ORFs cloned into?
-
Nearly all HaloTag® ORF clones (FHC) are provided in the pFN21A vector,
where HaloTag® is oriented at the N-terminus of the ORF sequence. The clone can
easily be transferred to alternate
Flexi® vectors, or you can
request a custom clone to be created.
Nearly all Native ORF clones (FXC) will be provided in the pF1K vector.
Again, the clone can easily be transferred to alternate
Flexi® vectors, or you can
request a custom clone to be created.
- What is the typical delivery time to receive my ORF clone?
-
The majority of ORF clones reach our customers within three weeks. However, please
allow up to 4-6 weeks for delivery.
- How much DNA will I receive?
-
You will receive 100ng of purified plasmid DNA in T.E. It is highly recommended
that you transform your ORF clone into
competent cells, and create a bacterial glycerol stock or additional purified
DNA prior to exhausting the 100ng received. If you would like a greater quantity
of DNA, please
request a custom clone.
- What quality testing does the ORF clone receive prior to shipment?
-
All ORF clones undergo quality testing to confirm size and sequence identity. In
addition, nearly all HaloTag® ORF clones are tested for protein expression and fluorescent
microscopy images in HEK293 cells when produced. This data is available in the Figures/Sequence
tab.
- How should the ORF Clone be stored?
-
The ORF Clone will be shipped to your lab at ambient temperature. Once received,
store the ORF Clone at -20°C for long-term storage, or at 2 – 8°C for immediate
use.
- How long is the ORF Clone good for? When will it expire?
-
Purified DNA in T.E. has been shown to be very stable over time. An expiration
date of two years is put on all ORF Clones when produced, but the clone may still
be viable years afterward. Once received, best practice suggests transforming your
ORF clone into
competent cells to create a safety glycerol bacterial stock(s), and/or additional
aliquots of purified DNA prior to exhausting the 100ng received.
- Which expression systems can be used for the ORF clones?
-
The HaloTag® ORF Clones (FHC) can be used in mammalian cells to express a HaloTag
fusion protein from a CMV promoter. In addition, these clones afford expression
in
Cell-Free Expression systems (specifically:
L1170,
L1171,
L4610, and
L4611). However, the FHC ORF clones are not
designed to express in E. coli, yeast, insect, or other expression systems.
The ORF can easily be transferred to alternate
Flexi® vectors as your expression system needs may change.
The Native ORF Clones (FXC) can be used in E. coli to express an untagged protein
from a T7 promoter. In addition, these clones afford expression in
Cell-Free Expression systems (specifically:
L1170,
L1171,
L4610,
L4611,
L1110,
L1115, and
L1130). However, the FXC ORF clones are not designed to express
in mammalian cells, yeast, insect, or other expression systems. However, the ORF
can easily be transferred to alternate
Flexi® vectors as your expression system needs may change.
- How can I
request a custom clone, or change the format of existing clones?
-
Many customers have specific requests regarding an ORF clone. Common requests include:
generating a new ORF clone to a human or mouse gene, transferring an existing ORF
clone into a different
Flexi® vector, requesting a larger quantity of DNA, or even requesting a
custom cell line from an ORF clone. All these requests and more can be accommodated.
Please let us know what you need by completing a custom clone request form.
Pricing and delivery times will vary based upon request.
- How do I request pricing for panels or the entire collection?
-
Contact us at proteomics@promega.com,
or speak to your local Promega representative. Discounts will be provided based
upon scale and format needs.
- Should I have a problem with my clone, who should I contact for assistance?
-
If you encounter issues with the integrity of the clone received, please contact
Kazusa DNA Research Institute at office@kazusa.or.jp
for troubleshooting ORF clone questions. If you are unsatisfied with your response,
please contact Promega at techserv@promega.com.
All questions about the HaloTag® technology should be directed to Promega.
- What is the relationship between Promega and Kazusa DNA Research Institute (KDRI)?
-
KDRI is an academic Japanese research institute dedicated to genome-scale studies
and the function of individual genes. The Kazusa ORFeome Project was initiated to
create a collection of human and mouse ORFs to enable the larger research community
with a readily accessible, highly validated ORFeome. KDRI is an active member of
the global ORFeome Collaboration, and are experts in HUGE (Human Unidentified Gene-Encoded)
large proteins, >4 kb. Promega and KDRI have established a partnership, allowing
Promega customers access to Kazusa's coveted collection of experimentally validated
clones.
- Are there any restrictions to using Promega's ORF clones?
-
HaloTag® and Native ORF clones are strictly to be used for research purposes only.
Persons wishing to use this product or its derivatives in other fields of use, including
without limitation, commercial sale, diagnostics or therapeutics, should contact
Promega Corporation for licensing information. Please refer to the
HaloTag® Limited Use Label Licenses, and other documentation provided at
shipment with the clone for further details.